Miyakogusa Predicted Gene

Lj1g3v3053740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5BE01_VITVI 131 91.0 95.5 (tr|A5BE01) Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_006723 PE=3 SV=1
TAIR_pep AT1G24260.2 128 93.8 96.9 | Symbols: SEP3, AGL9 | K-box region and MADS-box transcription factor family protein | chr1:8593790-8595862 REVERSE LENGTH=251
Medicago Medtr7g016600.1 130 88.1 95.5 | MADS-box transcription factor | HC | chr7:5229942-5235077 | 20130731
Soybean Glyma13g06730.1 129 88.1 95.5  
LJGI gnl|LJGI|TC75219 371 100.0 100.0 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1; Pisum sativum|Rep: MADS box protein M6 - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3053740.1 length: 185 aa.
IPR002100 Transcription factor, MADS-box
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0046983 protein dimerization activity    
FPrintScan PR00404 MADSDOMAIN 6.3e-33 3-23
23-38
38-59
HMMPfam PF00319 SRF-TF 3.1e-29 9-59
HMMSmart SM00432 no description 4.9e-41 1-60
PatternScan PS00350 MADS_BOX_1 NA 3-57
ProfileScan PS50066 MADS_BOX_2 33.361 1-61
superfamily SSF55455 SRF-like 9.8e-29 2-61
no_ID  
HMMPanther PTHR11945 MADS 9.1e-49 1-64
HMMPanther PTHR11945:SF19 MADS 9.1e-49 1-64
Wolf-PSORT
Lj1g3v3053740.1	nucl 11.5, cyto_nucl 6.5, chlo 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3053740.1