Miyakogusa Predicted Gene
- Lj1g3v3041520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MUZ9_SOYBN |
475 |
90.7 |
94.0 |
(tr|K7MUZ9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G13680.1 |
314 |
59.0 |
73.7 |
| Symbols: | PLC-like phosphodiesterases superfamily protein | chr1:4690409-4692702 FORWARD LENGTH=346 |
| Medicago |
Medtr7g015710.1 |
422 |
79.4 |
86.7 |
| PLC-like phosphodiesterase superfamily protein | HC | chr7:4885127-4880583 | 20130731 |
| Soybean |
Glyma19g04050.1 |
426 |
79.5 |
88.8 |
|
| LJGI |
gnl|LJGI|AV770798 |
218 |
83.1 |
83.1 |
similar to UniRef100_A7PAD3 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3041520.1 |
length: 248 aa. |
| IPR000909 |
Phospholipase C, phosphatidylinositol-specific , X domain |
| method |
AccNumber |
shortName |
E-value |
location |
| ProfileScan |
PS50007 |
PIPLC_X_DOMAIN |
10.878 |
74-182 |
| IPR017946 |
PLC-like phosphodiesterase, TIM beta/alpha-barrel domain |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| Molecular Function |
GO:0008081 |
phosphoric diester hydrolase activity |
|
|
| Gene3D |
G3DSA:3.20.20.190 |
no description |
3.1e-15 |
69-238 |
| superfamily |
SSF51695 |
PLC-like |
5.7e-35 |
60-248 |
| no_ID |
|
| HMMPanther |
PTHR31498 |
FAMILY |
1.6e-138 |
1-248 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
23 |
- Wolf-PSORT
Lj1g3v3041520.1 extr 7, vacu 2, chlo 1, cyto 1, mito 1, E.R. 1, golg 1, chlo_mito 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3041520.1 |
|