Miyakogusa Predicted Gene

Lj1g3v3022480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4T2_LOTJA 596 97.0 97.0 (tr|I3T4T2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G21140.1 316 57.8 71.9 | Symbols: emb1379 | embryo defective 1379 | chr5:7187416-7189521 REVERSE LENGTH=312
Medicago Medtr3g078850.1 520 71.9 82.1 | Nse1 non-SMC component of SMC5-6 complex family protein | HC | chr3:35602629-35597757 | 20130731
Soybean --No_Hits--        
LJGI gnl|LJGI|TC62786 1814 99.9 99.9 similar to UniRef100_A7PG47 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3022480.1 length: 344 aa.
IPR011513 Non-structural maintenance of chromosomes element 1
method AccNumber shortName E-value location
Biological Process GO:0006281 DNA repair    
Cellular Component GO:0030915 Smc5-Smc6 complex    
HMMPanther PTHR20973 NON-SMC 2.6e-76 1-289
HMMPfam PF07574 SMC_Nse1 1.3e-34 8-191
IPR014857 Zinc finger, RING-like
HMMPfam PF08746 zf-RING-like 7.4e-10 203-246
no_ID  
HMMPanther PTHR20973:SF0 SUBFAMILY 2.6e-76 1-289
Seg seg seg NA 279-284
superfamily SSF57850 RING/U-box 6.9e-07 196-268
Wolf-PSORT
Lj1g3v3022480.1	chlo 8, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3022480.1 Targeted 1.747 -1.886 -4.597 0.42% 8.230