Miyakogusa Predicted Gene

Lj1g3v3022320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N4J8_SOYBN 194 80.5 92.0 (tr|I1N4J8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G61030.1 151 59.3 84.1 | Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3 | chr5:24560870-24562152 FORWARD LENGTH=309
Medicago Medtr7g013730.1 181 72.6 92.9 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr7:3986546-3983001 | 20130731
Soybean Glyma18g50150.1 194 80.5 92.0  
LJGI gnl|LJGI|BW614023 672 100.0 100.0 similar to UniRef100_A7PDA4 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3022320.1 length: 113 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.3e-22 42-112
HMMSmart SM00360 RNA 2.8e-24 41-113
ProfileScan PS50102 RRM 20.969 40-113
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.1e-28 35-113
no_ID  
HMMPanther PTHR24012 FAMILY 3.2e-31 37-113
HMMPanther PTHR24012:SF156SUBFAMILY NOT 3.2e-31 37-113
superfamily SSF54928 RNA-binding 2e-27 16-113
Wolf-PSORT
Lj1g3v3022320.1	cyto 8.5, cyto_nucl 5, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3022320.1