Miyakogusa Predicted Gene
- Lj1g3v3020960.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KKY8_MEDTR |
378 |
60.5 |
76.1 |
(tr|G7KKY8) Serine/threonine-protein kinase OS=Medicago truncatula GN=MTR_6g012810 PE=3 SV=1 |
| TAIR_pep |
AT4G27290.1 |
237 |
43.0 |
60.2 |
| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783 |
| Medicago |
Medtr6g012810.1 |
382 |
60.8 |
76.4 |
| Serine/Threonine kinase family protein | HC | chr6:3983877-3978050 | 20130731 |
| Soybean |
Glyma15g34810.1 |
373 |
59.2 |
72.6 |
|
| LJGI |
gnl|LJGI|NP840531 |
52.0 |
96.7 |
96.7 |
GB|AJ580824.1|CAE45595.1 S-receptor kinase-like protein 2 [Lotus corniculatus var. japonicus] |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v3020960.1 |
length: 324 aa. |
| IPR000742 |
Epidermal growth factor-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50026 |
EGF_3 |
8.806 |
128-165 |
| IPR000858 |
S-locus glycoprotein |
| Biological Process |
GO:0048544 |
recognition of pollen |
|
|
| HMMPfam |
PF00954 |
S_locus_glycop |
2.4e-18 |
56-163 |
| IPR003609 |
Apple-like |
| HMMSmart |
SM00473 |
divergent |
4.3e-07 |
187-266 |
| ProfileScan |
PS50948 |
PAN |
9.530 |
184-267 |
| IPR013227 |
PAN-2 domain |
| HMMPfam |
PF08276 |
PAN_2 |
4.2e-19 |
188-252 |
| no_ID |
|
| HMMPanther |
PTHR11795 |
UNCHARACTERIZED |
6.9e-38 |
1-274 |
| HMMPanther |
PTHR11795:SF72 |
OS07G0550500 |
6.9e-38 |
1-274 |
| Seg |
seg |
seg |
NA |
303-314 |
- Wolf-PSORT
Lj1g3v3020960.1 cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v3020960.1 |
|