Miyakogusa Predicted Gene

Lj1g3v3019860.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SHN3_LOTJA 335 93.3 93.3 (tr|I3SHN3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G39670.1 159 50.8 67.0 | Symbols: | Calcium-binding EF-hand family protein | chr5:15883270-15883884 FORWARD LENGTH=204
Medicago Medtr5g025690.1 202 59.9 74.6 | EF hand calcium-binding family protein | HC | chr5:10477222-10478120 | 20130731
Soybean Glyma18g49540.1 234 69.6 78.5  
LJGI gnl|LJGI|TC68185 1055 98.7 98.7 weakly similar to UniRef100_A7PMY0 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3019860.1 length: 193 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 0.075 125-153
163-191
ProfileScan PS50222 EF_HAND_2 10.971 121-156
159-193
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 1.9e-17 73-137
138-190
HMMPfam PF13499 EF_hand_5 5.5e-11 126-188
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 134-146
172-184
no_ID  
HMMPanther PTHR10891 EF-HAND 5.2e-39 80-191
HMMPanther PTHR10891:SF137CALCIUM-BINDING EF 5.2e-39 80-191
Seg seg seg NA 14-25
superfamily SSF47473 EF-hand 2.9e-17 120-188
Wolf-PSORT
Lj1g3v3019860.1	nucl 6, extr 4, cyto 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3019860.1