Miyakogusa Predicted Gene

Lj1g3v3006720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TD17_SOYBN 244 51.5 60.2 (tr|C6TD17) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G61190.1 66.2 32.5 46.7 | Symbols: | putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain | chr5:24615480-24619886 FORWARD LENGTH=995
Medicago Medtr3g023750.1 89.7 34.5 49.3 | C2H2 type zf-met: zinc-finger protein | HC | chr3:7230508-7224689 | 20130731
Soybean Glyma18g49990.1 244 51.5 60.2  
LJGI gnl|LJGI|TC70569 912 99.8 99.8 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3006720.1 length: 332 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 0.44 194-228
289-323
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 6.9 197-221
292-316
no_ID  
HMMPanther PTHR23067 DOUBLE-STRANDED 1.2e-18 199-322
HMMPanther PTHR23067:SF21 ZINC 1.2e-18 199-322
HMMPfam PF12874 zf-met 1.9e-07 198-221
293-316
Seg seg seg NA 28-61
163-176
181-192
255-267
314-323
superfamily SSF57667 C2H2 0.00054 182-231
294-322
Wolf-PSORT
Lj1g3v3006720.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3006720.1