Miyakogusa Predicted Gene

Lj1g3v3006710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TD17_SOYBN 159 48.0 58.3 (tr|C6TD17) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep --No_Hits--        
Medicago Medtr3g023750.1 83.2 31.8 51.3 | C2H2 type zf-met: zinc-finger protein | HC | chr3:7230508-7224689 | 20130731
Soybean Glyma18g49990.1 159 48.0 58.3  
LJGI gnl|LJGI|BP043432 690 99.4 99.4 weakly similar to UniRef100_A7PN35 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3006710.1 length: 368 aa.
IPR003604 Zinc finger, U1-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00451 U1-like 0.00096 217-251
325-359
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 222-244
330-352
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 2.7 220-244
328-352
no_ID  
HMMPanther PTHR23067 DOUBLE-STRANDED 6.3e-16 222-358
HMMPanther PTHR23067:SF21 ZINC 6.3e-16 222-358
HMMPfam PF12874 zf-met 5.5e-09 220-244
329-352
Seg seg seg NA 8-18
58-96
239-251
superfamily SSF57667 C2H2 2.5e-05 330-358
205-254
Wolf-PSORT
Lj1g3v3006710.1	nucl 10.5, cyto_nucl 6.5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3006710.1