Miyakogusa Predicted Gene

Lj1g3v2996640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N4I0_SOYBN 1761 89.2 92.7 (tr|I1N4I0) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G15450.1 1610 83.4 90.6 | Symbols: APG6, CLPB3, CLPB-P | casein lytic proteinase B3 | chr5:5014399-5018255 REVERSE LENGTH=968
Medicago Medtr7g012820.1 1762 89.2 92.7 | casein lytic proteinase B3 | HC | chr7:3521223-3513549 | 20130731
Soybean Glyma13g05920.1 1699 86.9 91.5  
LJGI gnl|LJGI|TC68380 1322 99.4 99.4 similar to UniRef100_Q4LDR0 Cluster: Heat shock protein; n=1; Solanum lycopersicum|Rep: Heat shock protein - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2996640.1 length: 972 aa.
IPR001270 Chaperonin ClpA/B
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
FPrintScan PR00300 CLPPROTEASEA 3.3e-40 681-699
726-744
755-773
788-802
PatternScan PS00871 CLPAB_2 NA 711-729
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.6e-08 274-418
677-852
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.8e-13 279-411
IPR004176 Clp, N-terminal
Biological Process GO:0019538 protein metabolic process    
HMMPfam PF02861 Clp_N 4.9e-09 95-144
170-221
IPR013093 ATPase, AAA-2
Molecular Function GO:0005524 ATP binding    
HMMPfam PF07724 AAA_2 3.4e-56 676-844
IPR017730 Chaperonin ClpB
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0009408 response to heat    
Biological Process GO:0016485 protein processing    
HMMTigr TIGR03346 chaperone_ClpB: 0 82-934
IPR018368 Chaperonin ClpA/B, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00870 CLPAB_1 NA 370-382
IPR019489 Clp ATPase, C-terminal
HMMPfam PF10431 ClpB_D2-small 1.3e-25 851-930
HMMSmart SM01086 C-terminal, 1.1e-33 851-937
IPR023150 Double Clp-N motif
Gene3D G3DSA:1.10.1780.10 no description 4.8e-40 80-223
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3e-87 234-625
626-934
no_ID  
Coil coil coiled-coil NA 510-538
548-569
575-610
Gene3D G3DSA:1.10.8.60 no description 7.5e-29 419-502
862-934
Gene3D G3DSA:3.40.50.300 no description 1e-57 235-418
833-861
HMMPanther PTHR11638 ATP-DEPENDENT 0 67-964
HMMPanther PTHR11638:SF18 CHAPERONE 0 67-964
Seg seg seg NA 516-530
superfamily SSF81923 Double 9.7e-40 80-232
Wolf-PSORT
Lj1g3v2996640.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2996640.1