Miyakogusa Predicted Gene
- Lj1g3v2980360.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A2Q3Q9_MEDTR |
100 |
64.3 |
82.9 |
(tr|A2Q3Q9) Emp24/gp25L/p24 OS=Medicago truncatula GN=MTR_7g011490 PE=3 SV=1 |
| TAIR_pep |
AT1G26690.1 |
73.9 |
50.7 |
71.6 |
| Symbols: | emp24/gp25L/p24 family/GOLD family protein | chr1:9224299-9225682 REVERSE LENGTH=214 |
| Medicago |
Medtr7g011490.1 |
100 |
64.3 |
82.9 |
| emp24/gp25L/p24 family protein | HC | chr7:3095161-3097688 | 20130731 |
| Soybean |
Glyma13g05610.1 |
96.3 |
57.7 |
81.7 |
|
| LJGI |
gnl|LJGI|TC57274 |
73.8 |
90.2 |
90.2 |
similar to UniRef100_A7PMZ6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2980360.1 |
length: 100 aa. |
| IPR009038 |
GOLD |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPfam |
PF01105 |
EMP24_GP25L |
2e-05 |
22-70 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
3 |
25 |
| 63 |
85 |
- Wolf-PSORT
Lj1g3v2980360.1 extr 7, chlo 2, cyto 2, nucl 1, mito 1, vacu 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2980360.1 |
|