Miyakogusa Predicted Gene
- Lj1g3v2975890.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L1Y8_MEDTR |
195 |
50.7 |
61.0 |
(tr|G7L1Y8) F-box/LRR-repeat protein OS=Medicago truncatula GN=MTR_7g116250 PE=4 SV=1 |
| TAIR_pep |
AT3G26922.1 |
48.9 |
46.7 |
60.0 |
| Symbols: | F-box/RNI-like superfamily protein | chr3:9922858-9923891 FORWARD LENGTH=306 |
| Medicago |
Medtr7g116250.1 |
195 |
50.7 |
61.0 |
| F-box/RNI superfamily protein, putative | LC | chr7:47926644-47927423 | 20130731 |
| Soybean |
Glyma08g40890.1 |
53.5 |
31.9 |
50.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2975890.1 |
length: 274 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
0.00031 |
62-96 |
| ProfileScan |
PS50181 |
FBOX |
10.319 |
59-107 |
| superfamily |
SSF81383 |
F-box |
3.1e-08 |
57-102 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
5.8e-06 |
55-97 |
| Seg |
seg |
seg |
NA |
225-235 |
- Wolf-PSORT
Lj1g3v2975890.1 nucl 5, mito 4.5, cyto_mito 3, nucl_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2975890.1 |
|