Miyakogusa Predicted Gene
- Lj1g3v2965880.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N4D7_SOYBN |
503 |
92.4 |
96.2 |
(tr|I1N4D7) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT5G15250.1 |
456 |
87.9 |
94.3 |
| Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4950411-4952777 REVERSE LENGTH=688 |
| Medicago |
Medtr7g010800.1 |
490 |
89.4 |
93.9 |
| ATP-dependent zinc metalloprotease FTSH protein | HC | chr7:2728362-2723939 | 20130731 |
| Soybean |
Glyma18g49440.1 |
502 |
92.0 |
96.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2965880.1 |
length: 264 aa. |
| IPR000642 |
Peptidase M41 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004222 |
metalloendopeptidase activity |
|
|
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0006508 |
proteolysis |
|
|
| HMMPfam |
PF01434 |
Peptidase_M41 |
4.2e-78 |
31-241 |
| no_ID |
|
| Gene3D |
G3DSA:1.10.8.60 |
no description |
2.7e-12 |
2-46 |
| HMMPanther |
PTHR23076 |
METALLOPROTEASE |
9.7e-172 |
1-248 |
| HMMPanther |
PTHR23076:SF24 |
EMB2458 |
9.7e-172 |
1-248 |
| superfamily |
SSF140990 |
FtsH |
2.5e-64 |
51-244 |
- Wolf-PSORT
Lj1g3v2965880.1 cyto 9, chlo 2, nucl 1.5, cysk_nucl 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2965880.1 |
|