Miyakogusa Predicted Gene

Lj1g3v2953650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LG40_SOYBN 877 85.6 91.3 (tr|K7LG40) Translation factor GUF1 homolog, mitochondrial OS=Glycine max PE=3 SV=1
TAIR_pep AT5G39900.1 728 73.2 83.4 | Symbols: | Small GTP-binding protein | chr5:15976719-15978925 REVERSE LENGTH=663
Medicago Medtr7g009740.1 868 83.6 91.4 | translation factor GUF1-like protein | HC | chr7:2225410-2216634 | 20130731
Soybean Glyma09g39400.1 840 83.1 88.2  
LJGI gnl|LJGI|GO023122 1291 98.7 98.7 similar to UniRef100_A1YKF4 Cluster: GFP binding protein; n=1; Brachypodium sylvaticum|Rep: GFP binding protein - Brachypodium sylvaticum (False brome), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2953650.1 length: 487 aa.
IPR000795 Elongation factor, GTP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 1.9e-12 69-82
112-120
147-157
199-208
HMMPfam PF00009 GTP_EFTU 1.2e-48 67-254
PatternScan PS00301 EFACTOR_GTP NA 105-120
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 3.9e-06 278-348
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 9.8e-19 70-244
IPR006297 Elongation factor 4
Molecular Function GO:0005525 GTP binding    
HAMAP MF_00071 LepA 163.712 60-487
HMMPanther PTHR23115:SF40 GTP-BINDING 4.9e-247 47-487
HMMTigr TIGR01393 lepA: 1e-161 66-487
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 1.4e-17 256-355
IPR009022 Elongation factor G, III-V domain
superfamily SSF54980 EF-G 2.5e-14 362-443
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.6e-63 62-279
no_ID  
Gene3D G3DSA:3.30.70.870 no description 8.5e-16 366-440
Gene3D G3DSA:3.40.50.300 no description 6.9e-72 63-321
HMMPanther PTHR23115 TRANSLATION 4.9e-247 47-487
Seg seg seg NA 406-418
Wolf-PSORT
Lj1g3v2953650.1	chlo_mito 7.33333, mito 7, chlo 6.5, cyto_mito 4.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2953650.1