Miyakogusa Predicted Gene

Lj1g3v2953420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MVV5_SOYBN 778 79.3 87.6 (tr|K7MVV5) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT3G61360.1 498 54.6 73.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:22704630-22706126 REVERSE LENGTH=498
Medicago Medtr1g086500.1 231 32.1 54.0 | PPR containing plant-like protein | HC | chr1:38701697-38699329 | 20130731
Soybean Glyma19g01370.1 776 79.2 87.6  
LJGI gnl|LJGI|AV421981 523 97.5 97.5 similar to UniRef100_A7QH86 Cluster: Chromosome chr18 scaffold_96, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_96, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2953420.1 length: 495 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.029 169-194
202-231
416-440
HMMPfam PF13041 PPR_2 6.3e-11 233-279
306-350
HMMTigr TIGR00756 PPR: 0.00071 169-195
203-234
236-269
307-339
416-440
ProfileScan PS51375 PPR 8.342 91-125
127-157
165-195
199-233
234-268
304-338
269-303
339-373
374-408
409-443
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-82 45-474
HMMPanther PTHR24015:SF0 SUBFAMILY 1.8e-82 45-474
Seg seg seg NA 12-21
39-52
Wolf-PSORT
Lj1g3v2953420.1	pero 7, nucl 4, cyto_pero 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2953420.1