Miyakogusa Predicted Gene

Lj1g3v2952280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LFS2_SOYBN 452 77.4 81.2 (tr|K7LFS2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G17430.1 215 72.8 87.5 | Symbols: BBM | Integrase-type DNA-binding superfamily protein | chr5:5742542-5745568 REVERSE LENGTH=584
Medicago Medtr7g009410.1 385 74.1 79.4 | AP2 domain transcription factor | HC | chr7:2050515-2052629 | 20130731
Soybean Glyma18g49100.1 449 76.7 81.2  
LJGI gnl|LJGI|GO040275 969 99.2 99.2 similar to UniRef100_A7PMN8 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2952280.1 length: 297 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:3.30.730.10 no description 8.3e-17 9-44
79-138
HMMPfam PF00847 AP2 4.3e-15 78-129
HMMSmart SM00380 DNA-binding 6.2e-25 2-49
79-143
ProfileScan PS51032 AP2_ERF 18.268 1-43
79-137
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 6.5e-10 78-140
8-46
no_ID  
HMMPanther PTHR32467 FAMILY 1.4e-100 11-191
HMMPanther PTHR32467:SF0 SUBFAMILY 1.4e-100 11-191
Seg seg seg NA 199-218
Wolf-PSORT
Lj1g3v2952280.1	nucl 8, cyto 2, extr 2, pero 1, cysk 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2952280.1