Miyakogusa Predicted Gene

Lj1g3v2952270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L3D0_SOYBN 1004 60.6 70.5 (tr|I1L3D0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G45616.1 403 33.5 47.2 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994
Medicago Medtr7g007820.1 932 56.7 68.9 | LRR receptor-like kinase | HC | chr7:1695620-1698844 | 20130731
Soybean Glyma09g26930.1 925 58.2 68.8  
LJGI gnl|LJGI|TC65017 1334 97.7 97.7 similar to UniRef100_A2Q5U2 Cluster: Leucine-rich repeat; Leucine-rich repeat, cysteine-containing type; n=1; Medicago truncatula|Rep: Leucine-rich repeat; Leucine-rich repeat, cysteine-containing type - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2952270.1 length: 912 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.98 541-560
662-685
764-785
787-806
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 26 115-140
225-249
297-321
417-441
442-466
491-514
538-562
660-684
785-809
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 3.1e-10 38-86
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 5.2e-07 299-335
no_ID  
FPrintScan PR00019 LEURICHRPT 1.1e-05 541-554
785-798
Gene3D G3DSA:3.80.10.10 no description 1.4e-24 35-268
278-456
471-701
734-850
HMMPanther PTHR24420 FAMILY 1.9e-150 96-897
HMMPanther PTHR24420:SF480SUBFAMILY NOT 1.9e-150 96-897
HMMPfam PF13855 LRR_8 2.4e-06 589-648
Seg seg seg NA 6-22
222-233
417-430
756-772
881-897
superfamily SSF52047 RNI-like 7.4e-58 94-456
superfamily SSF52058 L 2.3e-55 469-844
Wolf-PSORT
Lj1g3v2952270.1	chlo 4, plas 3, vacu 3, nucl 2, chlo_mito 2, golg_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2952270.1