Miyakogusa Predicted Gene

Lj1g3v2940700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LFT2_SOYBN 791 48.8 55.9 (tr|K7LFT2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G60380.1 131 35.8 48.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink). | chr3:22316913-22319144 REVERSE LENGTH=743
Medicago Medtr7g007880.1 447 46.9 56.3 | transmembrane protein, putative | HC | chr7:1736773-1733666 | 20130731
Soybean Glyma18g48870.1 505 51.5 62.0  
LJGI gnl|LJGI|FS348874 1544 100.0 100.0 similar to UniRef100_A7PKD1 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2940700.1 length: 1074 aa.
IPR008480 Protein of unknown function DUF761, plant
method AccNumber shortName E-value location
HMMPfam PF05553 DUF761 5.9e-07 993-1020
no_ID  
Seg seg seg NA 29-46
245-263
338-349
751-776
795-805
974-985
1053-1063
Putative transmembrane regions
  From To
TM segments
SOSUI		 26 48
59 81
Wolf-PSORT
Lj1g3v2940700.1	nucl 6, plas 3.5, cyto_plas 2.5, extr 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2940700.1