Miyakogusa Predicted Gene

Lj1g3v2940670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L617_SOYBN 805 76.1 80.5 (tr|I1L617) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05940.1 635 61.1 72.5 | Symbols: CAT9 | cationic amino acid transporter 9 | chr1:1801365-1803942 REVERSE LENGTH=569
Medicago Medtr7g007850.1 769 73.0 79.2 | cationic amino acid transporter | HC | chr7:1709964-1715466 | 20130731
Soybean Glyma09g37700.1 805 76.1 80.5  
LJGI gnl|LJGI|TC71862 1283 100.0 100.0 similar to UniRef100_A7PKC8 Cluster: Chromosome chr15 scaffold_19, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_19, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2940670.1 length: 564 aa.
IPR002293 Amino acid/polyamine transporter I
method AccNumber shortName E-value location
Biological Process GO:0003333 amino acid transmembrane transport    
Molecular Function GO:0015171 amino acid transmembrane transporter activity    
Cellular Component GO:0016020 membrane    
HMMPIR PIRSF006060 Amino 1.2e-78 43-501
HMMPanther PTHR11785 AMINO 3.2e-183 3-564
IPR015606 Cationic amino acid transporter
HMMPanther PTHR11785:SF53 CATIONIC 3.2e-183 3-564
no_ID  
HMMPfam PF13520 AA_permease_2 2.1e-51 50-459
HMMPfam PF13906 AA_permease_C 8.3e-15 495-544
Seg seg seg NA 4-23
41-51
55-68
191-195
218-225
335-348
353-364
466-482
Putative transmembrane regions
  From To
TM segments
SOSUI		 50 72
88 110
135 157
178 200
210 232
248 270
285 307
326 348
381 400
402 423
440 461
463 481
495 517
520 541
Wolf-PSORT
Lj1g3v2940670.1	plas 5, E.R. 4, chlo 2.5, chlo_mito 2.5, nucl_plas 2.5, golg_plas 2.5, E.R._vacu 2.5, cysk_plas 2.5, cyto_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2940670.1