Miyakogusa Predicted Gene
- Lj1g3v2938400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KPE5_SOYBN |
446 |
68.4 |
79.1 |
(tr|K7KPE5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G14850.1 |
213 |
41.3 |
58.4 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G33890.2); Has 140 Blast hits to 132 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 133; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). | chr2:6386400-6387275 FORWARD LENGTH=291 |
| Medicago |
Medtr4g095490.1 |
209 |
60.6 |
72.3 |
| transcriptional regulator of RNA polII, SAGA, subunit | LC | chr4:39817649-39814422 | 20130731 |
| Soybean |
Glyma17g17720.1 |
412 |
69.7 |
79.8 |
|
| LJGI |
gnl|LJGI|TC64224 |
553 |
100.0 |
100.0 |
similar to UniRef100_Q2HVM4 Cluster: Transferase; n=1; Medicago truncatula|Rep: Transferase - Medicago truncatula (Barrel medic), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2938400.1 |
length: 327 aa. |
| IPR024738 |
Transcriptional coactivator Hfi1/Transcriptional adapter 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0070461 |
SAGA-type complex |
|
|
| HMMPfam |
PF12767 |
SAGA-Tad1 |
1e-52 |
10-271 |
| no_ID |
|
| HMMPanther |
PTHR31538 |
FAMILY |
2.3e-71 |
1-327 |
| HMMPanther |
PTHR31538:SF0 |
SUBFAMILY |
2.3e-71 |
1-327 |
- Wolf-PSORT
Lj1g3v2938400.1 nucl 7, golg_plas 2, plas 1.5, golg 1.5, chlo 1, cyto 1, mito 1, pero 1, chlo_mito 1, cyto_pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2938400.1 |
|