Miyakogusa Predicted Gene

Lj1g3v2927340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N480_SOYBN 948 74.8 85.6 (tr|I1N480) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G44880.1 608 51.6 69.8 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:18505239-18506906 FORWARD LENGTH=555
Medicago Medtr7g005870.1 861 69.8 81.5 | PPR containing plant-like protein | HC | chr7:378521-375734 | 20130731
Soybean Glyma18g48780.1 948 74.8 85.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2927340.1 length: 612 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.026 175-200
203-232
235-264
370-395
469-493
HMMPfam PF13041 PPR_2 9.9e-10 293-335
397-442
HMMTigr TIGR00756 PPR: 1.3e-09 203-233
235-264
265-294
296-331
399-432
ProfileScan PS51375 PPR 5.338 91-121
232-266
201-231
170-200
135-169
294-329
267-293
396-430
365-395
431-465
466-496
498-532
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00025 463-549
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-205 11-612
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 2.1e-205 11-612
Wolf-PSORT
Lj1g3v2927340.1	cyto 8.5, cyto_nucl 6.5, nucl 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2927340.1