Miyakogusa Predicted Gene
- Lj1g3v2908520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TMF0_SOYBN |
252 |
65.3 |
76.5 |
(tr|C6TMF0) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr7g092700.1 |
235 |
65.9 |
75.1 |
| PRA1 family protein | HC | chr7:36770328-36771788 | 20130731 |
| Soybean |
Glyma18g48420.1 |
252 |
65.3 |
76.5 |
|
| LJGI |
gnl|LJGI|TC80437 |
952 |
98.7 |
98.7 |
weakly similar to UniRef100_A6EZN4 Cluster: Predicted membrane protein; n=1; Marinobacter algicola DG893|Rep: Predicted membrane protein - Marinobacter algicola DG893, partial (11%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2908520.1 |
length: 185 aa. |
| IPR004895 |
Prenylated rab acceptor PRA1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03208 |
PRA1 |
9.2e-07 |
44-168 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
11-19 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
59 |
80 |
| 83 |
105 |
| 112 |
134 |
| 141 |
163 |
- Wolf-PSORT
Lj1g3v2908520.1 cyto 4, chlo 2.5, chlo_mito 2.5, cyto_E.R. 2.5, cyto_plas 2.5, nucl 2, vacu 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2908520.1 |
|