Miyakogusa Predicted Gene
- Lj1g3v2908510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LFV6_SOYBN |
586 |
67.6 |
78.1 |
(tr|K7LFV6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G23520.1 |
300 |
42.9 |
57.8 |
| Symbols: | smr (Small MutS Related) domain-containing protein | chr5:7929591-7931296 REVERSE LENGTH=435 |
| Medicago |
Medtr7g081260.3 |
551 |
66.1 |
76.9 |
| Smr (small MutS-related) domain protein | HC | chr7:31002088-31007756 | 20130731 |
| Soybean |
Glyma09g37990.1 |
546 |
65.6 |
76.9 |
|
| LJGI |
gnl|LJGI|BP040650 |
672 |
100.0 |
100.0 |
similar to UniRef100_A2Q1V5 Cluster: Smr protein/MutS2 C-terminal; n=1; Medicago truncatula|Rep: Smr protein/MutS2 C-terminal - Medicago truncatula (Barrel medic), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2908510.1 |
length: 433 aa. |
| IPR002625 |
Smr protein/MutS2 C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01713 |
Smr |
2.2e-11 |
316-427 |
| HMMSmart |
SM00463 |
Small |
1.3e-05 |
313-429 |
| ProfileScan |
PS50828 |
SMR |
19.549 |
316-429 |
| IPR013899 |
Domain of unknown function DUF1771 |
| HMMPfam |
PF08590 |
DUF1771 |
6.7e-07 |
245-305 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
257-269 |
- Wolf-PSORT
Lj1g3v2908510.1 mito 7, nucl 3.5, cyto_nucl 3.5, chlo_mito 3.5, cyto_mito 3.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2908510.1 |
|