Miyakogusa Predicted Gene

Lj1g3v2898460.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N446_SOYBN 164 89.3 95.2 (tr|I1N446) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G44710.1 126 67.9 84.5 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18432902-18436629 FORWARD LENGTH=809
Medicago Medtr8g007390.3 158 85.7 92.9 | heterogeneous nuclear ribonucleoprotein | HC | chr8:1510737-1506382 | 20130731
Soybean Glyma18g48360.1 164 89.3 95.2  
LJGI gnl|LJGI|FS331270 910 99.6 99.6 weakly similar to UniRef100_A2Q1V9 Cluster: RNA-binding region RNP-1; n=1; Medicago truncatula|Rep: RNA-binding region RNP-1 - Medicago truncatula (Barrel medic), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2898460.3 length: 328 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 8.8e-21 200-269
HMMSmart SM00360 RNA 1.2e-22 199-272
ProfileScan PS50102 RRM 17.046 198-276
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.7e-24 201-328
no_ID  
HMMPanther PTHR24012 FAMILY 6.6e-82 88-328
HMMPanther PTHR24012:SF59 SUBFAMILY 6.6e-82 88-328
Seg seg seg NA 7-22
24-49
85-101
116-202
287-305
307-320
superfamily SSF54928 RNA-binding 2.2e-25 197-328
Wolf-PSORT
Lj1g3v2898460.3	cyto 6, nucl 4, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2898460.3