- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N445_SOYBN |
557 |
77.5 |
88.8 |
(tr|I1N445) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT4G17070.1 |
427 |
57.4 |
74.4 |
| Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595523-9598066 REVERSE LENGTH=343 |
| Medicago |
Medtr7g081200.1 |
520 |
74.1 |
83.9 |
| peptidyl-prolyl cis-trans isomerase | HC | chr7:30971799-30967214 | 20130731 |
| Soybean |
Glyma18g48350.1 |
552 |
76.9 |
88.5 |
|
| LJGI |
gnl|LJGI|BP046417 |
262 |
100.0 |
100.0 |
weakly similar to UniRef100_A2Q1W0 Cluster: Peptidyl-prolyl cis-trans isomerase, cyclophilin type; n=1; Medicago truncatula|Rep: Peptidyl-prolyl cis-trans isomerase, cyclophilin type - Medicago truncatula (Barrel medic), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2898440.1 |
length: 338 aa. |
| IPR002130 |
Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
|
|
| Biological Process |
GO:0006457 |
protein folding |
|
|
| HMMPfam |
PF00160 |
Pro_isomerase |
5.2e-10 |
172-317 |
| superfamily |
SSF50891 |
Cyclophilin-like |
8.2e-20 |
157-327 |
| no_ID |
|
| Gene3D |
G3DSA:2.40.100.10 |
no description |
1.8e-11 |
167-319 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
6.000 |
1-26 |
| Seg |
seg |
seg |
NA |
50-69 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
14 |
36 |
- Wolf-PSORT
Lj1g3v2898440.1 cyto 5, extr 3, chlo 2, plas 2, mito 1, vacu 1, nucl_plas 1, golg_plas 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2898440.1 |
|