Miyakogusa Predicted Gene

Lj1g3v2835980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N3Z5_SOYBN 1006 83.0 91.3 (tr|I1N3Z5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G47390.2 888 73.2 86.5 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase family protein | chr3:17462094-17464655 FORWARD LENGTH=596
Medicago Medtr7g080117.1 1009 83.3 91.8 | riboflavin biosynthesis protein RibD | HC | chr7:30448458-30456962 | 20130731
Soybean Glyma18g47790.1 1006 83.0 91.3  
LJGI gnl|LJGI|TC79897 654 99.4 99.4 similar to UniRef100_A7PV60 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2835980.1 length: 590 aa.
IPR002125 CMP/dCMP deaminase, zinc-binding
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
HMMPfam PF00383 dCMP_cyt_deam_1 9.2e-06 33-128
IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal
Molecular Function GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity    
Biological Process GO:0009231 riboflavin biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01872 RibD_C 4.7e-43 188-390
IPR004794 Riboflavin biosynthesis protein RibD
Molecular Function GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity    
Biological Process GO:0009231 riboflavin biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00326 eubact_ribD: 5.9e-73 37-390
IPR011549 Riboflavin-specific deaminase, C-terminal
Molecular Function GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity    
Biological Process GO:0009231 riboflavin biosynthetic process    
Molecular Function GO:0050661 NADP binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00227 ribD_Cterm: 1.3e-56 185-392
IPR012816 Conserved hypothetical protein CHP02464
HMMPfam PF08719 DUF1768 4e-42 426-579
HMMTigr TIGR02464 ribofla_fusion: 1.5e-44 426-578
IPR016193 Cytidine deaminase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF53927 Cytidine 3.2e-19 31-153
IPR024072 Dihydrofolate reductase-like domain
Gene3D G3DSA:3.40.430.10 no description 1.8e-67 164-394
superfamily SSF53597 Dihydrofolate 2.4e-54 186-398
no_ID  
Gene3D G3DSA:3.40.140.10 no description 2.4e-12 24-139
HMMPanther PTHR11079 CYTOSINE 3e-300 24-531
HMMPanther PTHR11079:SF21 SUBFAMILY 3e-300 24-531
superfamily SSF143990 YbiA-like 1.2e-49 410-583
Wolf-PSORT
Lj1g3v2835980.1	chlo 6, cyto 3, chlo_mito 3, nucl 2, plas 2, nucl_plas 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2835980.1