Miyakogusa Predicted Gene
- Lj1g3v2834940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SMD6_MEDTR |
600 |
83.4 |
90.4 |
(tr|I3SMD6) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT3G14850.2 |
457 |
66.4 |
76.3 |
| Symbols: TBL41 | TRICHOME BIREFRINGENCE-LIKE 41 | chr3:4995615-4997611 FORWARD LENGTH=356 |
| Medicago |
Medtr2g073510.1 |
604 |
84.0 |
90.7 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr2:31168510-31163192 | 20130731 |
| Soybean |
Glyma12g36200.1 |
571 |
84.1 |
90.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2834940.1 |
length: 357 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
1.2e-22 |
35-88 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
3.4e-71 |
90-354 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
5.1e-139 |
34-356 |
| Seg |
seg |
seg |
NA |
18-33 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
7 |
28 |
- Wolf-PSORT
Lj1g3v2834940.1 extr 8, chlo 2, nucl 1, cyto 1, vacu 1, cysk 1, cyto_nucl 1, chlo_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2834940.1 |
|