Miyakogusa Predicted Gene

Lj1g3v2822810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KN57_SOYBN 572 62.5 75.3 (tr|K7KN57) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G26790.1 340 40.1 58.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:11425270-11427669 REVERSE LENGTH=799
Medicago Medtr3g091500.1 468 54.6 65.7 | pentatricopeptide (PPR) repeat protein | LC | chr3:41625715-41628184 | 20130731
Soybean Glyma07g34170.1 578 63.5 75.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2822810.1 length: 449 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00098 192-213
254-284
HMMPfam PF12854 PPR_1 1.7e-05 18-48
122-152
HMMPfam PF13041 PPR_2 1.7e-14 61-105
286-332
358-402
HMMTigr TIGR00756 PPR: 3.4e-06 24-57
61-93
94-128
254-288
289-323
360-393
395-428
ProfileScan PS51375 PPR 12.299 22-56
57-91
92-126
127-161
217-251
182-216
252-286
287-321
358-392
322-357
393-427
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-05 221-417
no_ID  
HMMPanther PTHR24015 FAMILY 1.3e-99 2-446
HMMPanther PTHR24015:SF0 SUBFAMILY 1.3e-99 2-446
superfamily SSF48452 TPR-like 0.0098 358-419
22-119
Wolf-PSORT
Lj1g3v2822810.1	cyto 11, chlo 1, nucl 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2822810.1