Miyakogusa Predicted Gene

Lj1g3v2809560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MUG7_SOYBN 1088 81.1 87.3 (tr|K7MUG7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G23330.1 469 39.2 58.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:8347200-8349347 FORWARD LENGTH=715
Medicago Medtr7g079860.1 1036 77.9 85.1 | pentatricopeptide (PPR) repeat protein | HC | chr7:30342642-30345393 | 20130731
Soybean Glyma18g47690.1 1066 80.8 87.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2809560.1 length: 631 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.07 85-113
116-145
189-209
225-251
298-321
HMMPfam PF13041 PPR_2 1.4e-09 323-371
HMMTigr TIGR00756 PPR: 1.2e-06 85-115
227-251
327-360
ProfileScan PS51375 PPR 8.079 17-51
1-16
83-117
52-82
118-148
184-218
223-253
258-292
324-358
293-323
359-393
461-495
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.9e-05 454-482
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-238 6-631
HMMPanther PTHR24015:SF45 SUBFAMILY 1.8e-238 6-631
HMMPfam PF14432 DYW_deaminase 3.5e-17 507-621
Seg seg seg NA 154-165
Wolf-PSORT
Lj1g3v2809560.1	chlo 11, nucl 1, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2809560.1