Miyakogusa Predicted Gene

Lj1g3v2809170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L6B1_SOYBN 687 79.3 84.3 (tr|I1L6B1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G02830.1 462 58.0 68.4 | Symbols: ZFN1 | zinc finger protein 1 | chr3:614075-615916 FORWARD LENGTH=397
Medicago Medtr7g079840.1 670 78.4 82.7 | zinc finger CCCH domain protein | HC | chr7:30331631-30324378 | 20130731
Soybean Glyma09g38650.1 687 79.3 84.3  
LJGI gnl|LJGI|TC69422 2426 99.8 99.8 similar to UniRef100_Q2HW14 Cluster: Zinc finger, CCCH-type; Sugar transporter superfamily; n=1; Medicago truncatula|Rep: Zinc finger, CCCH-type; Sugar transporter superfamily - Medicago truncatula (Barrel medic), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2809170.1 length: 410 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00088 84-104
HMMPfam PF00642 zf-CCCH 8.8e-10 34-60
81-105
127-151
282-308
328-354
HMMSmart SM00356 zinc 1.4e-07 33-60
78-105
124-151
281-308
327-354
ProfileScan PS50103 ZF_C3H1 14.821 34-61
78-106
124-152
281-309
327-355
no_ID  
HMMPanther PTHR12506 PROTEIN 1e-145 14-405
HMMPanther PTHR12506:SF11 ZINC 1e-145 14-405
Seg seg seg NA 319-332
369-389
superfamily SSF90229 CCCH 0.00011 119-158
73-112
276-315
322-361
28-67
Wolf-PSORT
Lj1g3v2809170.1	nucl 11, chlo 1, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2809170.1