Miyakogusa Predicted Gene

Lj1g3v2713920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L045_SOYBN 1328 77.6 85.1 (tr|K7L045) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G46060.1 861 52.7 68.1 | Symbols: | transmembrane protein-related | chr2:18941355-18945000 REVERSE LENGTH=807
Medicago Medtr8g028875.1 1327 80.4 88.1 | transmembrane protein, putative | HC | chr8:11181933-11189518 | 20130731
Soybean Glyma07g07470.1 1152 79.7 87.4  
LJGI gnl|LJGI|TC65762 1114 99.8 99.8 similar to UniRef100_A7PZM7 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2713920.1 length: 817 aa.
IPR013032 EGF-like, conserved site
method AccNumber shortName E-value location
PatternScan PS00022 EGF_1 NA 549-560
IPR021910 Protein of unknown function DUF3522
HMMPfam PF12036 DUF3522 1.7e-59 568-775
no_ID  
HMMPanther PTHR14319 FIVE-SPAN 3.6e-185 14-788
HMMPanther PTHR14319:SF3 SUBFAMILY 3.6e-185 14-788
Seg seg seg NA 10-30
681-695
Putative transmembrane regions
  From To
TM segments
SOSUI		 9 31
569 591
631 653
669 691
709 731
740 762
766 788
Wolf-PSORT
Lj1g3v2713920.1	plas 11, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2713920.1