Miyakogusa Predicted Gene

Lj1g3v2671480.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1N3R8_SOYBN 287 71.7 83.7 (tr|I1N3R8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G46000.1 170 50.9 67.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:18921194-18922047 REVERSE LENGTH=208

Medicago Medtr7g077890.2 278 73.3 82.2 | hypothetical protein | HC | chr7:29425866-29424159 | 20130731

Soybean Glyma18g46850.1 287 71.7 83.7

LJGI gnl|LJGI|BP034977 343 99.4 99.4 similar to UniRef100_A7PZI2 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2671480.1 length: 240 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 21-36
50-56
74-86

Wolf-PSORT

Lj1g3v2671480.1 vacu 5, chlo 4, mito 2, nucl 1, pero 1, golg 1, cyto_mito 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2671480.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1N3R8_SOYBN	287	71.7	83.7	(tr\|I1N3R8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G46000.1	170	50.9	67.6	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr2:18921194-18922047 REVERSE LENGTH=208
Medicago	Medtr7g077890.2	278	73.3	82.2	\| hypothetical protein \| HC \| chr7:29425866-29424159 \| 20130731
Soybean	Glyma18g46850.1	287	71.7	83.7
LJGI	gnl\|LJGI\|BP034977	343	99.4	99.4	similar to UniRef100_A7PZI2 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)

no_ID
Lj1g3v2671480.1				length: 240 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	21-36 50-56 74-86