Miyakogusa Predicted Gene
- Lj1g3v2671470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T9K2_LOTJA |
517 |
94.4 |
94.4 |
(tr|I3T9K2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G45990.2 |
404 |
72.4 |
83.2 |
| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | chr2:18919402-18921043 FORWARD LENGTH=268 |
| Medicago |
Medtr7g077880.1 |
465 |
82.8 |
89.6 |
| hypothetical protein | HC | chr7:29421803-29423713 | 20130731 |
| Soybean |
Glyma18g46830.1 |
435 |
78.7 |
86.9 |
|
| LJGI |
gnl|LJGI|TC59561 |
1618 |
100.0 |
100.0 |
similar to UniRef100_A7PZI1 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2671470.1 |
length: 270 aa. |
| IPR023214 |
HAD-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
6e-05 |
140-250 |
| superfamily |
SSF56784 |
HAD-like |
5.5e-07 |
1-251 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
65-78 |
- Wolf-PSORT
Lj1g3v2671470.1 cyto 7.5, cyto_E.R. 4.83333, pero 2, E.R._vacu 1.33333, chlo 1, mito 1, E.R. 1, cysk 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2671470.1 |
|