Miyakogusa Predicted Gene

Lj1g3v2658210.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6SYV1_SOYBN 100 74.6 93.2 (tr|C6SYV1) Uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep AT1G01730.1 67.8 46.8 79.0 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:271002-271872 FORWARD LENGTH=224

Medicago Medtr7g077380.1 89.7 67.7 85.5 | hypothetical protein | HC | chr7:29214815-29217290 | 20130731

Soybean Glyma18g46600.1 100 74.6 93.2

LJGI gnl|LJGI|TC58876 553 100.0 100.0 similar to UniRef100_A7PZD1 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2658210.1 length: 93 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 11-31

Wolf-PSORT

Lj1g3v2658210.1 nucl 7, cyto 3, extr 2, chlo 1, cysk 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2658210.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6SYV1_SOYBN	100	74.6	93.2	(tr\|C6SYV1) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	AT1G01730.1	67.8	46.8	79.0	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 1; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:271002-271872 FORWARD LENGTH=224
Medicago	Medtr7g077380.1	89.7	67.7	85.5	\| hypothetical protein \| HC \| chr7:29214815-29217290 \| 20130731
Soybean	Glyma18g46600.1	100	74.6	93.2
LJGI	gnl\|LJGI\|TC58876	553	100.0	100.0	similar to UniRef100_A7PZD1 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)

no_ID
Lj1g3v2658210.1				length: 93 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	11-31