Miyakogusa Predicted Gene

Lj1g3v2628710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SFM9_LOTJA 197 86.2 86.2 (tr|I3SFM9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G61260.1 110 68.1 78.7 | Symbols: | Remorin family protein | chr3:22675403-22676701 REVERSE LENGTH=212
Medicago Medtr8g031370.1 114 72.0 77.4 | carboxy-terminal region remorin | HC | chr8:11753967-11749805 | 20130731
Soybean Glyma09g39730.1 130 71.6 84.2  
LJGI gnl|LJGI|TC59730 716 99.5 99.5 similar to UniRef100_A7PZA3 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2628710.1 length: 141 aa.
IPR005516 Remorin, C-terminal
method AccNumber shortName E-value location
HMMPfam PF03763 Remorin_C 2.2e-12 73-123
IPR005518 Remorin, N-terminal
HMMPfam PF03766 Remorin_N 2.5e-09 15-72
no_ID  
Coil coil coiled-coil NA 104-125
HMMPanther PTHR31775 FAMILY 1.2e-31 18-123
Seg seg seg NA 14-29
Putative transmembrane regions
  From To
TM segments
SOSUI		 121 140
Wolf-PSORT
Lj1g3v2628710.1	chlo 6, cyto 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2628710.1