Miyakogusa Predicted Gene

Lj1g3v2611620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL R4HCC8_SOYBN 2679 59.2 71.6 (tr|R4HCC8) Rpp4 candidate R10 OS=Glycine max GN=Rpp4R10 PE=4 SV=1
TAIR_pep AT4G27220.1 186 30.0 45.5 | Symbols: | NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919
Medicago Medtr8g028500.1 1354 38.0 55.0 | Rpp4C1 | HC | chr8:10848011-10860059 | 20130731
Soybean Glyma18g46050.1 2385 54.5 67.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2611620.1 length: 2454 aa.
IPR000767 Disease resistance protein
method AccNumber shortName E-value location
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.4e-17 179-194
253-267
397-411
670-686
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 1e-19 161-281
321-464
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.00028 176-383
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.7e-29 137-426
no_ID  
Coil coil coiled-coil NA 32-64
155-176
Gene3D G3DSA:3.40.50.300 no description 1.5e-12 161-272
Gene3D G3DSA:3.80.10.10 no description 5.4e-08 827-892
1002-1153
1342-1546
1697-1746
2140-2237
HMMPanther PTHR23155 LEUCINE-RICH 1.4e-51 7-2381
HMMPanther PTHR23155:SF37 LEUCINE-RICH 1.4e-51 7-2381
Seg seg seg NA 177-189
193-206
260-272
1171-1185
1837-1852
2038-2049
2095-2105
2416-2426
superfamily SSF52047 RNI-like 8.1e-05 1344-1656
990-1241
1932-2238
1678-1922
2261-2422
superfamily SSF52058 L 1e-32 519-970
Wolf-PSORT
Lj1g3v2611620.1	nucl 7, cyto 3, plas 3, cyto_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2611620.1