Miyakogusa Predicted Gene

Lj1g3v2611340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L6R2_SOYBN 1250 77.4 82.7 (tr|I1L6R2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G00730.1 974 71.0 79.6 | Symbols: ANL2, AHDP | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr4:299741-304103 REVERSE LENGTH=802
Medicago Medtr8g432540.1 1164 73.5 80.2 | homeobox leucine zipper protein | HC | chr8:12328205-12321574 | 20130731
Soybean Glyma09g40130.1 1250 77.4 82.7  
LJGI gnl|LJGI|FS341512 1259 100.0 100.0 similar to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2611340.1 length: 810 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 2.2e-18 117-172
HMMSmart SM00389 Homeodomain 2.2e-17 115-178
ProfileScan PS50071 HOMEOBOX_2 17.443 114-174
IPR002913 START domain
HMMPfam PF01852 START 1.8e-61 325-548
HMMSmart SM00234 in 4.8e-46 325-548
ProfileScan PS50848 START 44.647 316-551
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.3e-20 104-174
superfamily SSF46689 Homeodomain-like 3.1e-20 100-173
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 149-172
no_ID  
Coil coil coiled-coil NA 168-204
HMMPanther PTHR24325 FAMILY 0 88-810
HMMPanther PTHR24325:SF0 SUBFAMILY 0 88-810
Seg seg seg NA 44-58
79-97
101-112
322-334
748-765
superfamily SSF55961 Bet 5.8e-24 315-551
573-805
Wolf-PSORT
Lj1g3v2611340.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2611340.1