Miyakogusa Predicted Gene

Lj1g3v2610300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N3I6_SOYBN 460 64.7 72.2 (tr|I1N3I6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G61180.1 332 48.4 63.4 | Symbols: | RING/U-box superfamily protein | chr3:22645680-22647290 FORWARD LENGTH=379
Medicago Medtr7g076010.1 430 62.3 68.6 | RING zinc finger protein, putative | HC | chr7:28563510-28559568 | 20130731
Soybean Glyma18g45940.1 459 64.4 71.9  
LJGI gnl|LJGI|TC60825 965 100.0 100.0 similar to UniRef100_A7PXY8 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2610300.1 length: 357 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.5e-14 302-344
HMMSmart SM00184 Ring 5.6e-08 303-343
ProfileScan PS50089 ZF_RING_2 12.578 303-344
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.7e-17 299-347
no_ID  
HMMPanther PTHR11203 CLEAVAGE 2.1e-66 8-213
HMMPanther PTHR11203:SF8 INTEGRATOR 2.1e-66 8-213
Seg seg seg NA 34-47
111-116
121-128
144-153
213-224
superfamily SSF57850 RING/U-box 3.4e-20 290-350
Putative transmembrane regions
  From To
TM segments
SOSUI		 56 77
87 109
172 194
200 222
226 248
Wolf-PSORT
Lj1g3v2610300.1	plas 9, vacu 3, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2610300.1