Miyakogusa Predicted Gene

Lj1g3v2610290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KW48_SOYBN 860 69.4 76.0 (tr|K7KW48) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G32490.1 741 61.1 71.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein | chr1:11742356-11749286 REVERSE LENGTH=1044
Medicago Medtr3g023880.2 855 68.3 74.5 | pre-mRNA-splicing factor ATP-dependent RNA helicase | HC | chr3:7279343-7291756 | 20130731
Soybean Glyma01g04790.2 624 75.1 83.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2610290.1 length: 638 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 0.00022 598-637
ProfileScan PS51194 HELICASE_CTER 9.857 550-638
IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00690 DEAH_ATP_HELICASE NA 469-478
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 0.00014 368-510
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 8.8e-31 352-536
ProfileScan PS51192 HELICASE_ATP_BIND_1 20.129 364-527
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.4e-69 348-638
no_ID  
Coil coil coiled-coil NA 174-195
Gene3D G3DSA:3.40.50.300 no description 3e-54 353-511
HMMPanther PTHR18934 ATP-DEPENDENT 4.3e-203 11-638
HMMPanther PTHR18934:SF68 SUBFAMILY 4.3e-203 11-638
Seg seg seg NA 57-71
99-114
178-192
211-228
338-354
408-420
Wolf-PSORT
Lj1g3v2610290.1	cyto 9, nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2610290.1