Miyakogusa Predicted Gene

Lj1g3v2584600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I3SCU0_LOTJA 368 76.8 86.8 (tr|I3SCU0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G42700.1 227 54.0 66.4 | Symbols: | AP2/B3-like transcriptional factor family protein | chr5:17122171-17124177 FORWARD LENGTH=211
Medicago Medtr3g101520.1 317 71.7 79.1 | B3 domain transcription factor | HC | chr3:46725903-46730052 | 20130731
Soybean Glyma04g04030.1 345 72.2 84.3  
LJGI gnl|LJGI|BP050885 547 100.0 100.0 weakly similar to UniRef100_Q69V36 Cluster: Transcriptional factor B3-like; n=2; Oryza sativa Japonica Group|Rep: Transcriptional factor B3-like - Oryza sativa subsp. japonica (Rice), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2584600.1 length: 228 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.7e-14 130-219
HMMSmart SM01019 B3 1.9e-20 130-221
ProfileScan PS50863 B3 12.323 130-221
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 4.5e-18 125-219
superfamily SSF101936 DNA-binding 5.9e-24 122-222
no_ID  
Coil coil coiled-coil NA 3-24
106-127
HMMPanther PTHR31391 FAMILY 1.4e-90 1-227
Wolf-PSORT
Lj1g3v2584600.1	nucl 6, cyto 5, mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2584600.1