Miyakogusa Predicted Gene

Lj1g3v2581180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T422_LOTJA 796 94.0 94.0 (tr|I3T422) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G01970.1 457 59.2 76.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:338538-339905 FORWARD LENGTH=409
Medicago Medtr7g075010.1 594 75.0 86.1 | PPR containing plant-like protein | HC | chr7:28129559-28126539 | 20130731
Soybean Glyma18g45330.1 604 71.7 82.9  
LJGI gnl|LJGI|BP039174 841 100.0 100.0 weakly similar to UniRef100_A7PYA1 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2581180.1 length: 414 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 7.9e-06 174-202
208-235
243-270
HMMPfam PF13812 PPR_3 0.011 277-308
317-344
HMMTigr TIGR00756 PPR: 0.00036 174-205
208-238
243-273
314-345
ProfileScan PS51375 PPR 5.974 170-204
205-239
240-274
275-309
310-344
345-379
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-06 174-301
no_ID  
HMMPanther PTHR24015 FAMILY 4.8e-59 122-404
HMMPanther PTHR24015:SF12 SUBFAMILY 4.8e-59 122-404
Seg seg seg NA 7-19
394-404
Wolf-PSORT
Lj1g3v2581180.1	chlo 9, mito 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2581180.1