Miyakogusa Predicted Gene
- Lj1g3v2580950.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC82231 |
256 |
99.2 |
99.2 |
homologue to UniRef100_A7PUI9 Cluster: Histone H2A; n=1; Vitis vinifera|Rep: Histone H2A - Vitis vinifera (Grape), partial (25%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2580950.2 |
length: 57 aa. |
| IPR008740 |
Peptidase C30, Coronavirus endopeptidase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0019082 |
viral protein processing |
|
|
| ProfileScan |
PS51442 |
M_PRO |
8.583 |
1-57 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
30 |
52 |
- Wolf-PSORT
Lj1g3v2580950.2 cyto 5, nucl 4, chlo 2, cysk_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2580950.2 |
|