Miyakogusa Predicted Gene
- Lj1g3v2570510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N3D1_SOYBN |
711 |
86.5 |
92.2 |
(tr|I1N3D1) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G48110.1 |
322 |
43.0 |
60.9 |
| Symbols: REF4, MED33B | reduced epidermal fluorescence 4 | chr2:19673370-19679494 FORWARD LENGTH=1275 |
| Medicago |
Medtr7g074290.1 |
692 |
84.5 |
91.5 |
| mediator of RNA polymerase II transcription subunit 33A | HC | chr7:27762202-27771907 | 20130731 |
| Soybean |
Glyma18g45100.1 |
710 |
86.6 |
92.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2570510.1 |
length: 399 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31130 |
FAMILY |
5.4e-92 |
1-399 |
| HMMPanther |
PTHR31130:SF0 |
SUBFAMILY |
5.4e-92 |
1-399 |
- Wolf-PSORT
Lj1g3v2570510.1 plas 7, vacu 3, E.R. 2, extr 1, golg 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2570510.1 |
Not targeted |
-33.247 |
-14.167 |
-7.487 |
37.66% |
-11.593
|