Miyakogusa Predicted Gene

Lj1g3v2556370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T5T5_LOTJA 753 91.1 91.4 (tr|I3T5T5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G01990.1 573 71.9 80.0 | Symbols: | Auxin efflux carrier family protein | chr5:377373-379600 REVERSE LENGTH=431
Medicago Medtr7g074190.1 632 77.8 83.7 | auxin efflux carrier family protein | HC | chr7:27722273-27717476 | 20130731
Soybean Glyma09g40760.1 633 76.6 83.6  
LJGI gnl|LJGI|TC67301 1453 99.6 99.6 similar to UniRef100_A7Q9U9 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2556370.1 length: 418 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 1.5e-71 31-410
no_ID  
HMMPanther PTHR31419 FAMILY 9.7e-214 1-418
HMMPanther PTHR31419:SF0 SUBFAMILY 9.7e-214 1-418
Seg seg seg NA 16-26
131-138
335-344
Putative transmembrane regions
  From To
TM segments
SOSUI		 21 43
62 84
94 116
126 148
171 192
257 279
290 312
329 351
385 407
Wolf-PSORT
Lj1g3v2556370.1	chlo 8, plas 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2556370.1 Not targeted -97.027 -52.843 -16.730 99.92% -27.454