Miyakogusa Predicted Gene

Lj1g3v2546210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L6X0_SOYBN 505 88.7 91.1 (tr|I1L6X0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G38610.2 450 85.6 91.6 | Symbols: | RNA-binding KH domain-containing protein | chr2:16147552-16149638 REVERSE LENGTH=286
Medicago Medtr7g074100.1 480 85.1 89.4 | RNA-binding KH domain protein | HC | chr7:27677743-27671597 | 20130731
Soybean Glyma09g40820.1 505 88.7 91.1  
LJGI gnl|LJGI|TC67660 1029 98.9 98.9 similar to UniRef100_A7Q9W1 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2546210.1 length: 281 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 2.8e-06 131-231
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 0.00022 148-177
ProfileScan PS50084 KH_TYPE_1 8.471 148-205
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 1.7e-41 131-259
HMMPanther PTHR11208 RNA-BINDING 2e-106 2-272
Seg seg seg NA 259-273
superfamily SSF54791 Eukaryotic 2e-32 132-256
Wolf-PSORT
Lj1g3v2546210.1	nucl 7, nucl_plas 5.83333, cyto_nucl 4.33333, plas 3.5, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2546210.1