Miyakogusa Predicted Gene

Lj1g3v2536150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L6X3_SOYBN 1217 81.6 89.9 (tr|I1L6X3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G56690.1 931 61.8 78.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:21253817-21255931 FORWARD LENGTH=704
Medicago Medtr7g074040.1 1165 78.2 87.6 | pentatricopeptide (PPR) repeat protein | HC | chr7:27639852-27642151 | 20130731
Soybean Glyma09g40850.1 1217 81.6 89.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2536150.1 length: 707 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.068 53-75
83-112
114-144
145-173
238-264
269-297
301-329
373-394
474-498
HMMPfam PF12854 PPR_1 1.4e-08 203-233
HMMPfam PF13041 PPR_2 2.2e-11 398-445
HMMTigr TIGR00756 PPR: 2.2e-08 83-113
114-145
145-175
179-206
207-236
401-434
ProfileScan PS51375 PPR 5.064 112-146
81-111
50-80
174-208
147-173
236-270
209-235
298-332
271-297
399-433
368-398
333-367
434-464
470-500
536-570
502-532
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 5e-08 499-555
no_ID  
HMMPanther PTHR24015 FAMILY 0 25-707
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 0 25-707
HMMPfam PF14432 DYW_deaminase 2.3e-17 611-697
Seg seg seg NA 336-350
superfamily SSF48452 TPR-like 3.3e-06 185-562
Wolf-PSORT
Lj1g3v2536150.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2536150.1