Miyakogusa Predicted Gene

Lj1g3v2534840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SI80_LOTJA 219 99.1 99.1 (tr|I3SI80) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G20280.1 177 76.1 88.1 | Symbols: TAF11 | TBP-associated factor 11 | chr4:10953792-10954664 FORWARD LENGTH=210
Medicago Medtr1g047200.1 203 88.1 95.4 | transcription initiation factor TFIID, subunit TAF11 | HC | chr1:17814615-17817715 | 20130731
Soybean Glyma03g00420.2 211 94.5 98.2  
LJGI gnl|LJGI|TC76251 654 100.0 100.0 similar to UniRef100_A7QK63 Cluster: Chromosome chr19 scaffold_111, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_111, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2534840.1 length: 109 aa.
IPR006809 TAFII28-like protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006367 transcription initiation from RNA polymerase II promoter    
HMMPanther PTHR13218 FAMILY 6.9e-67 1-109
HMMPfam PF04719 TAFII28 1.3e-36 4-93
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 1.5e-32 11-99
superfamily SSF47113 Histone-fold 3.9e-29 11-100
no_ID  
HMMPanther PTHR13218:SF5 SUBFAMILY 6.9e-67 1-109
Putative transmembrane regions
  From To
TM segments
SOSUI		 48 70
Wolf-PSORT
Lj1g3v2534840.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2534840.1