Miyakogusa Predicted Gene
- Lj1g3v2534830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MJ31_SOYBN |
709 |
87.1 |
93.0 |
(tr|K7MJ31) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G01930.1 |
560 |
69.3 |
83.1 |
| Symbols: MAN6, AtMAN6 | Glycosyl hydrolase superfamily protein | chr5:361189-362867 REVERSE LENGTH=448 |
| Medicago |
Medtr8g005670.1 |
687 |
84.8 |
91.9 |
| mannan endo-1,4-beta-mannosidase-like protein | HC | chr8:280839-282802 | 20130731 |
| Soybean |
Glyma03g00440.1 |
670 |
89.0 |
94.9 |
|
| LJGI |
gnl|LJGI|TC58756 |
1568 |
100.0 |
100.0 |
similar to UniRef100_A7QFQ7 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2534830.1 |
length: 384 aa. |
| IPR001547 |
Glycoside hydrolase, family 5 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00150 |
Cellulase |
2.2e-15 |
72-373 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
1.9e-115 |
60-382 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
2.6e-72 |
57-382 |
| no_ID |
|
| HMMPanther |
PTHR31451 |
FAMILY |
1.3e-205 |
55-384 |
- Wolf-PSORT
Lj1g3v2534830.1 chlo 5, vacu 4, nucl 1, cyto 1, extr 1, E.R. 1, pero 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2534830.1 |
|