Miyakogusa Predicted Gene

Lj1g3v2482420.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7LGG1_SOYBN 330 49.9 58.7 (tr|K7LGG1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G51580.1 149 38.3 57.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to 1607 proteins in 294 species: Archae - 2; Bacteria - 552; Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38; Other Eukaryotes - 253 (source: NCBI BLink). | chr3:19131167-19133016 REVERSE LENGTH=390

Medicago Medtr7g073280.1 303 52.2 60.7 | transmembrane protein, putative | HC | chr7:27366686-27373900 | 20130731

Soybean Glyma18g44610.2 311 48.6 56.7

LJGI gnl|LJGI|TC60734 607 100.0 100.0 weakly similar to UniRef100_Q1EPA3 Cluster: Protein kinase family protein; n=1; Musa acuminata|Rep: Protein kinase family protein - Musa acuminata (Banana), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v2482420.1 length: 380 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 6-15
106-142
239-248
335-346

Putative transmembrane regions

From To

TM segments
SOSUI 5 27

282 303

Wolf-PSORT

Lj1g3v2482420.1 plas 7.5, golg_plas 5.5, vacu 3, golg 2.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v2482420.1 Not targeted -53.384 0 -11.806 80.13% -41.578

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7LGG1_SOYBN	330	49.9	58.7	(tr\|K7LGG1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G51580.1	149	38.3	57.4	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1768 Blast hits to 1607 proteins in 294 species: Archae - 2; Bacteria - 552; Metazoa - 381; Fungi - 236; Plants - 306; Viruses - 38; Other Eukaryotes - 253 (source: NCBI BLink). \| chr3:19131167-19133016 REVERSE LENGTH=390
Medicago	Medtr7g073280.1	303	52.2	60.7	\| transmembrane protein, putative \| HC \| chr7:27366686-27373900 \| 20130731
Soybean	Glyma18g44610.2	311	48.6	56.7
LJGI	gnl\|LJGI\|TC60734	607	100.0	100.0	weakly similar to UniRef100_Q1EPA3 Cluster: Protein kinase family protein; n=1; Musa acuminata\|Rep: Protein kinase family protein - Musa acuminata (Banana), partial (7%)

no_ID
Lj1g3v2482420.1				length: 380 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	6-15 106-142 239-248 335-346