Miyakogusa Predicted Gene

Lj1g3v2431850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KW12_MEDTR 763 74.4 83.3 (tr|G7KW12) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g072070 PE=4 SV=1
TAIR_pep AT2G38420.1 386 43.1 63.5 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:16091093-16092454 FORWARD LENGTH=453
Medicago Medtr7g072070.1 761 74.7 83.5 | PPR containing plant-like protein | HC | chr7:26781971-26778389 | 20130731
Soybean Glyma09g41580.1 702 74.2 82.5  
LJGI gnl|LJGI|FS328451 1296 100.0 100.0 weakly similar to UniRef100_A7QFI8 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2431850.1 length: 502 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.01 194-223
267-295
300-329
406-433
441-468
HMMPfam PF13041 PPR_2 9.1e-18 332-381
HMMTigr TIGR00756 PPR: 0.00076 194-226
268-299
300-334
335-369
370-403
441-473
ProfileScan PS51375 PPR 9.339 120-154
191-225
226-262
263-297
298-332
333-367
368-402
403-437
438-472
no_ID  
HMMPanther PTHR24015 FAMILY 6.8e-88 62-481
Seg seg seg NA 53-65
157-174
Wolf-PSORT
Lj1g3v2431850.1	mito 5, chlo_mito 4.83333, chlo 3.5, cyto_mito 3.33333, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2431850.1