Miyakogusa Predicted Gene

Lj1g3v2418700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L754_SOYBN 1575 83.6 89.8 (tr|I1L754) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G08840.2 1186 67.4 81.8 | Symbols: | D-alanine--D-alanine ligase family | chr3:2679648-2686157 REVERSE LENGTH=937
Medicago Medtr7g071990.1 1567 83.5 90.6 | D-alanine-D-alanine ligase | HC | chr7:26735511-26724110 | 20130731
Soybean Glyma09g41600.1 1543 82.3 88.5  
LJGI gnl|LJGI|TC62154 983 99.2 99.2 similar to UniRef100_A7QFI6 Cluster: Chromosome chr8 scaffold_88, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_88, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2418700.1 length: 942 aa.
IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site
method AccNumber shortName E-value location
PatternScan PS00843 DALA_DALA_LIGASE_1 NA 633-644
PatternScan PS00844 DALA_DALA_LIGASE_2 NA 877-906
IPR005905 D-alanine--D-alanine ligase
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008716 D-alanine-D-alanine ligase activity    
Biological Process GO:0009252 peptidoglycan biosynthetic process    
HMMPanther PTHR23132 D-ALANINE--D-ALANINE 3e-148 41-942
IPR011095 D-alanine--D-alanine ligase, C-terminal
Molecular Function GO:0008716 D-alanine-D-alanine ligase activity    
HMMPfam PF07478 Dala_Dala_lig_C 5.1e-12 207-442
807-911
IPR011127 D-alanine--D-alanine ligase, N-terminal domain
HMMPfam PF01820 Dala_Dala_lig_N 2.6e-15 85-184
483-656
IPR011761 ATP-grasp fold
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0046872 metal ion binding    
ProfileScan PS50975 ATP_GRASP 9.541 200-443
872-938
IPR013816 ATP-grasp fold, subdomain 2
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.470.20 no description 1.6e-23 189-295
296-451
805-919
IPR016185 Pre-ATP-grasp domain
Gene3D G3DSA:3.40.50.20 no description 2.5e-33 84-184
577-655
superfamily SSF52440 PreATP-grasp 1.4e-19 481-665
62-194
no_ID  
HMMPanther PTHR23132:SF0 SUBFAMILY 3e-148 41-942
Seg seg seg NA 4-13
superfamily SSF56059 Glutathione 1.8e-14 195-456
666-919
Wolf-PSORT
Lj1g3v2418700.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2418700.1